probeBase

Complete list of probes
(Probes tested for in situ hybridization are marked in light yellow.)

Short name	Accession no.	Specificity
1	pB-00549	Universal

10	pB-00385	Bacillus medusa, B. thuringiensis

11	pB-00386	Bacillus medusa, B. thuringiensis

1109TY1R	pB-01060	Methanobrevibacter-related endosymbionts of Reticulitermes speratus

1109TY2R	pB-01061	Methanobrevibacter-related endosymbionts of Reticulitermes speratus

1109TY3R	pB-01062	Methanobrevibacter-related endosymbionts of Reticulitermes speratus

1174TY1R	pB-01063	Methanobrevibacter-related endosymbionts of Reticulitermes speratus

1174TY2R	pB-01064	Methanobrevibacter-related endosymbionts of Reticulitermes speratus

1174TY3R	pB-01065	Methanobrevibacter-related endosymbionts of Reticulitermes speratus

12	pB-00387	Bacillus medusa, B. thuringiensis

129(DSB129)	pB-00073	most Desulfobacter

13	pB-00388	Bacillus medusa, B. thuringiensis

14	pB-00389	Bacillus mycoides

1445_ProNATL	pB-00763	Prochlorococcus LL (Cyanophyceae)

15	pB-00390	Bacillus mycoides

16	pB-00391	Bacillus mycoides

17	pB-00392	Bacillus mycoides

18	pB-00393	Bacillus anthracis, B. cereus

181_ProHLI	pB-00760	Prochlorococcus HLI (Cyanophyceae)

181_ProLL	pB-00764	Prochlorococcus LL (Cyanophyceae)

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If you use probeBase as a tool in your published research, we ask that this paper be cited:
Loy A, Maixner F, Wagner M, Horn M. 2007. probeBase - an online resource for rRNA-targeted oligonucleotide probes: new features 2007. Nucleic Acids Res. 35: D800-D804.

PDF
Suggested wording: (i) "Oligonucleotide probe sequences have been deposited at probeBase.", or (ii) "Details on oligonucleotide probes are available at probeBase."

by Alexander Loy, Frank Maixner, Michael Wagner, Matthias Horn

Acknowledgment

Questions, comments, bug reports, and suggestions are welcome at

probebase@microbial-ecology.net